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Aliases : evm_27.TU.AmTr_v1.0_scaffold00057.43
No description available
Gene families : OG0006266 (Archaeplastida) Phylogenetic Tree(s): OG0006266_tree ,
OG_05_0004900 (LandPlants) Phylogenetic Tree(s): OG_05_0004900_tree ,
OG_06_0012723 (SeedPlants) Phylogenetic Tree(s): OG_06_0012723_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00057p00072880 | |
| Cluster | HCCA: Cluster_249 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G23370 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.02 | Archaeplastida | |
| MA_10427827g0020 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Pp3c5_17310V3.1 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| CC | GO:0000228 | nuclear chromosome | IEP | Neighborhood |
| BP | GO:0000726 | non-recombinational repair | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003678 | DNA helicase activity | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0003855 | 3-dehydroquinate dehydratase activity | IEP | Neighborhood |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
| MF | GO:0003918 | DNA topoisomerase type II (ATP-hydrolyzing) activity | IEP | Neighborhood |
| MF | GO:0004003 | ATP-dependent DNA helicase activity | IEP | Neighborhood |
| MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | Neighborhood |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | Neighborhood |
| MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
| MF | GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity | IEP | Neighborhood |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Neighborhood |
| MF | GO:0004832 | valine-tRNA ligase activity | IEP | Neighborhood |
| MF | GO:0005319 | lipid transporter activity | IEP | Neighborhood |
| MF | GO:0005342 | organic acid transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0005343 | organic acid:sodium symporter activity | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| CC | GO:0005694 | chromosome | IEP | Neighborhood |
| BP | GO:0006082 | organic acid metabolic process | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006265 | DNA topological change | IEP | Neighborhood |
| BP | GO:0006281 | DNA repair | IEP | Neighborhood |
| BP | GO:0006302 | double-strand break repair | IEP | Neighborhood |
| BP | GO:0006303 | double-strand break repair via nonhomologous end joining | IEP | Neighborhood |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006399 | tRNA metabolic process | IEP | Neighborhood |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Neighborhood |
| BP | GO:0006438 | valyl-tRNA aminoacylation | IEP | Neighborhood |
| BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
| BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0006528 | asparagine metabolic process | IEP | Neighborhood |
| BP | GO:0006529 | asparagine biosynthetic process | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0006814 | sodium ion transport | IEP | Neighborhood |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood |
| MF | GO:0008028 | monocarboxylic acid transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| MF | GO:0008508 | bile acid:sodium symporter activity | IEP | Neighborhood |
| MF | GO:0008514 | organic anion transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| MF | GO:0015081 | sodium ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015125 | bile acid transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015293 | symporter activity | IEP | Neighborhood |
| MF | GO:0015294 | solute:cation symporter activity | IEP | Neighborhood |
| MF | GO:0015355 | secondary active monocarboxylate transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015370 | solute:sodium symporter activity | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| BP | GO:0016073 | snRNA metabolic process | IEP | Neighborhood |
| MF | GO:0016301 | kinase activity | IEP | Neighborhood |
| BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
| MF | GO:0016740 | transferase activity | IEP | Neighborhood |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
| MF | GO:0016853 | isomerase activity | IEP | Neighborhood |
| MF | GO:0016874 | ligase activity | IEP | Neighborhood |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Neighborhood |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
| MF | GO:0030246 | carbohydrate binding | IEP | Neighborhood |
| MF | GO:0030515 | snoRNA binding | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| BP | GO:0031120 | snRNA pseudouridine synthesis | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
| BP | GO:0033554 | cellular response to stress | IEP | Neighborhood |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Neighborhood |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| BP | GO:0036211 | protein modification process | IEP | Neighborhood |
| BP | GO:0040031 | snRNA modification | IEP | Neighborhood |
| BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
| BP | GO:0043038 | amino acid activation | IEP | Neighborhood |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Neighborhood |
| MF | GO:0043138 | 3'-5' DNA helicase activity | IEP | Neighborhood |
| MF | GO:0043140 | ATP-dependent 3'-5' DNA helicase activity | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Neighborhood |
| BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| MF | GO:0046943 | carboxylic acid transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0051716 | cellular response to stimulus | IEP | Neighborhood |
| MF | GO:0061505 | DNA topoisomerase II activity | IEP | Neighborhood |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Neighborhood |
| BP | GO:0071103 | DNA conformation change | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Neighborhood |
| MF | GO:0097747 | RNA polymerase activity | IEP | Neighborhood |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Neighborhood |
| MF | GO:0140161 | monocarboxylate:sodium symporter activity | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| MF | GO:1901618 | organic hydroxy compound transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:2001070 | starch binding | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |