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  5. AMTR_s00057p00083990

AMTR_s00057p00083990 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00057.55

Description : ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis thaliana


Gene families : OG0000499 (Archaeplastida) Phylogenetic Tree(s): OG0000499_tree ,
OG_05_0008353 (LandPlants) Phylogenetic Tree(s): OG_05_0008353_tree ,
OG_06_0009781 (SeedPlants) Phylogenetic Tree(s): OG_06_0009781_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00057p00083990
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01036944001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0008026 ATP-dependent helicase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006098 pentose-phosphate shunt IEP Neighborhood
BP GO:0006338 chromatin remodeling IEP Neighborhood
BP GO:0006739 NADP metabolic process IEP Neighborhood
CC GO:0008290 F-actin capping protein complex IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0010024 phytochromobilin biosynthetic process IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010038 response to metal ion IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Neighborhood
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Neighborhood
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Neighborhood
BP GO:0019478 D-amino acid catabolic process IEP Neighborhood
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Neighborhood
BP GO:0019748 secondary metabolic process IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
BP GO:0030029 actin filament-based process IEP Neighborhood
BP GO:0030036 actin cytoskeleton organization IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
CC GO:0030131 clathrin adaptor complex IEP Neighborhood
MF GO:0031491 nucleosome binding IEP Neighborhood
BP GO:0032957 inositol trisphosphate metabolic process IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0043044 ATP-dependent chromatin remodeling IEP Neighborhood
BP GO:0043647 inositol phosphate metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0044550 secondary metabolite biosynthetic process IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0046416 D-amino acid metabolic process IEP Neighborhood
BP GO:0046937 phytochelatin metabolic process IEP Neighborhood
BP GO:0046938 phytochelatin biosynthetic process IEP Neighborhood
MF GO:0047325 inositol tetrakisphosphate 1-kinase activity IEP Neighborhood
MF GO:0050897 cobalt ion binding IEP Neighborhood
BP GO:0051156 glucose 6-phosphate metabolic process IEP Neighborhood
BP GO:0051202 phytochromobilin metabolic process IEP Neighborhood
MF GO:0051765 inositol tetrakisphosphate kinase activity IEP Neighborhood
MF GO:0051766 inositol trisphosphate kinase activity IEP Neighborhood
MF GO:0052725 inositol-1,3,4-trisphosphate 6-kinase activity IEP Neighborhood
MF GO:0052726 inositol-1,3,4-trisphosphate 5-kinase activity IEP Neighborhood
CC GO:0071203 WASH complex IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 209 378
IPR001650 Helicase_C 448 522
No external refs found!