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  5. AMTR_s00057p00103160

AMTR_s00057p00103160 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00057.78

Description : Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PPD1 protein


Gene families : OG0007588 (Archaeplastida) Phylogenetic Tree(s): OG0007588_tree ,
OG_05_0008732 (LandPlants) Phylogenetic Tree(s): OG_05_0008732_tree ,
OG_06_0008917 (SeedPlants) Phylogenetic Tree(s): OG_06_0008917_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00057p00103160
Cluster HCCA: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
Cre08.g362900 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 Archaeplastida
LOC_Os12g37710.1 No alias PPD1 protein involved in PS-I assembly 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003913 DNA photolyase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
InterPro domains Description Start Stop
IPR002683 PsbP 6 185
No external refs found!