AMTR_s00057p00197800 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00057.225

Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.VPS20 component


Gene families : OG0004319 (Archaeplastida) Phylogenetic Tree(s): OG0004319_tree ,
OG_05_0004821 (LandPlants) Phylogenetic Tree(s): OG_05_0004821_tree ,
OG_06_0005858 (SeedPlants) Phylogenetic Tree(s): OG_06_0005858_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00057p00197800
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
MA_10433802g0010 No alias component VPS20 of ESCRT-III complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
InterPro domains Description Start Stop
IPR005024 Snf7_fam 17 181
No external refs found!