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  5. AMTR_s00057p00210380

AMTR_s00057p00210380 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00057.259

Description : Vesicle trafficking.autophagosome formation.ATG9-2-18 membrane shuttling complex.ATG18 component


Gene families : OG0001600 (Archaeplastida) Phylogenetic Tree(s): OG0001600_tree ,
OG_05_0001405 (LandPlants) Phylogenetic Tree(s): OG_05_0001405_tree ,
OG_06_0001795 (SeedPlants) Phylogenetic Tree(s): OG_06_0001795_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00057p00210380
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
Smo171378 No alias Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 344 371
No external refs found!