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  5. AMTR_s00058p00099960

AMTR_s00058p00099960 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00058.55

No description available


Gene families : OG0005055 (Archaeplastida) Phylogenetic Tree(s): OG0005055_tree ,
OG_05_0004716 (LandPlants) Phylogenetic Tree(s): OG_05_0004716_tree ,
OG_06_0004375 (SeedPlants) Phylogenetic Tree(s): OG_06_0004375_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00058p00099960
Cluster HCCA: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g55890.1 No alias isopentenyl phosphate kinase 0.02 Archaeplastida
Smo92970 No alias No description available 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0008652 cellular amino acid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Neighborhood
MF GO:0004645 phosphorylase activity IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006760 folic acid-containing compound metabolic process IEP Neighborhood
MF GO:0008184 glycogen phosphorylase activity IEP Neighborhood
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Neighborhood
BP GO:0042558 pteridine-containing compound metabolic process IEP Neighborhood
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051090 regulation of DNA-binding transcription factor activity IEP Neighborhood
BP GO:0051205 protein insertion into membrane IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001048 Asp/Glu/Uridylate_kinase 10 290
No external refs found!