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  5. AMTR_s00058p00133630

AMTR_s00058p00133630 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00058.96

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor


Gene families : OG0002570 (Archaeplastida) Phylogenetic Tree(s): OG0002570_tree ,
OG_05_0001939 (LandPlants) Phylogenetic Tree(s): OG_05_0001939_tree ,
OG_06_0005507 (SeedPlants) Phylogenetic Tree(s): OG_06_0005507_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00058p00133630
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
AT2G20570 ATGLK1, GPRI1, GLK1 GBF's pro-rich region-interacting factor 1 0.02 Archaeplastida
AT5G44190 GPRI2, ATGLK2, GLK2 GOLDEN2-like 2 0.06 Archaeplastida
GSVIVT01020604001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
LOC_Os01g13740.1 No alias G2-like GARP transcription factor 0.06 Archaeplastida
LOC_Os06g24070.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Pp3c7_5800V3.1 No alias GBF\s pro-rich region-interacting factor 1 0.02 Archaeplastida
Smo428906 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Zm00001e016357_P002 No alias G2-like GARP transcription factor 0.06 Archaeplastida
Zm00001e036073_P002 No alias G2-like GARP transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001505 regulation of neurotransmitter levels IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003913 DNA photolyase activity IEP Neighborhood
MF GO:0004047 aminomethyltransferase activity IEP Neighborhood
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006544 glycine metabolic process IEP Neighborhood
BP GO:0006546 glycine catabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009071 serine family amino acid catabolic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
MF GO:0016851 magnesium chelatase activity IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
MF GO:0019203 carbohydrate phosphatase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity IEP Neighborhood
BP GO:0042133 neurotransmitter metabolic process IEP Neighborhood
BP GO:0042135 neurotransmitter catabolic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050308 sugar-phosphatase activity IEP Neighborhood
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Neighborhood
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 192 241
No external refs found!