AMTR_s00058p00136280 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00058.98

Description : RNA biosynthesis.transcriptional activation.NAC transcription factor

Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000015 (LandPlants) Phylogenetic Tree(s): OG_05_0000015_tree ,
OG_06_0000025 (SeedPlants) Phylogenetic Tree(s): OG_06_0000025_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00058p00136280
Cluster	HCCA: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00079p00099620	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
AT1G12260	EMB2749,...	NAC 007	0.05	Archaeplastida
AT1G32510	NAC011, ANAC011	NAC domain containing protein 11	0.05	Archaeplastida
AT1G32770	ANAC012, NST3,...	NAC domain containing protein 12	0.05	Archaeplastida
AT1G33280	BRN1, ANAC015, NAC015	NAC domain containing protein 15	0.03	Archaeplastida
AT1G54330	ANAC020, NAC020	NAC domain containing protein 20	0.03	Archaeplastida
AT1G62700	VND5, ANAC026	Arabidopsis NAC domain containing protein 26	0.05	Archaeplastida
AT1G65910	anac028, NAC028	NAC domain containing protein 28	0.02	Archaeplastida
AT1G71930	ANAC030, VND7	vascular related NAC-domain protein 7	0.04	Archaeplastida
AT1G79580	SMB, ANAC033	NAC (No Apical Meristem) domain transcriptional...	0.02	Archaeplastida
AT2G18060	VND1, ANAC037	vascular related NAC-domain protein 1	0.04	Archaeplastida
AT2G24430	ANAC039, NAC038, ANAC038	NAC domain containing protein 38	0.03	Archaeplastida
AT2G46770	NST1, ANAC043, EMB2301	NAC (No Apical Meristem) domain transcriptional...	0.04	Archaeplastida
AT3G03200	anac045, NAC045	NAC domain containing protein 45	0.06	Archaeplastida
AT3G12977	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
AT3G15170	ANAC054, ATNAC1, CUC1	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
AT3G17730	anac057, NAC057	NAC domain containing protein 57	0.06	Archaeplastida
AT3G18400	anac058, NAC058	NAC domain containing protein 58	0.03	Archaeplastida
AT3G61910	NST2, NAC066, ANAC066	NAC domain protein 66	0.04	Archaeplastida
AT4G17980	anac071, NAC071	NAC domain containing protein 71	0.04	Archaeplastida
AT4G36160	VND2, NAC076, ANAC076	NAC domain containing protein 76	0.04	Archaeplastida
AT5G08790	anac081, ATAF2	NAC (No Apical Meristem) domain transcriptional...	0.05	Archaeplastida
AT5G17260	NAC086, anac086	NAC domain containing protein 86	0.08	Archaeplastida
AT5G46590	anac096, NAC096	NAC domain containing protein 96	0.04	Archaeplastida
AT5G62380	NAC101, VND6, ANAC101	NAC-domain protein 101	0.02	Archaeplastida
GSVIVT01001264001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
GSVIVT01007194001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01007982001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
GSVIVT01008291001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.08	Archaeplastida
GSVIVT01013419001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01014287001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
GSVIVT01016176001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
GSVIVT01018623001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
GSVIVT01018809001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
GSVIVT01019670001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
GSVIVT01020478001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01027431001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
GSVIVT01029392001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.1	Archaeplastida
GSVIVT01035214001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.07	Archaeplastida
GSVIVT01035554001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.07	Archaeplastida
Gb_07132	No alias	transcription factor (NAC)	0.04	Archaeplastida
Gb_37720	No alias	transcription factor (NAC)	0.03	Archaeplastida
Gb_41026	No alias	transcription factor (NAC)	0.02	Archaeplastida
Gb_41540	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os01g60020.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os01g66120.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os02g15340.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os03g42630.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os03g60080.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os05g34600.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os05g34830.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os06g23650.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os07g12340.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os08g02160.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os08g02300.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os08g40030.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os09g24560.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os09g32260.2	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os10g42130.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_10426704g0010	No alias	transcription factor (NAC)	0.04	Archaeplastida
MA_10431189g0020	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_138461g0010	No alias	transcription factor (NAC)	0.05	Archaeplastida
MA_18939g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_21732g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_5017g0010	No alias	transcription factor (NAC)	0.06	Archaeplastida
MA_73369g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_75192g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_95225g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
Mp6g02590.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Pp3c20_18130V3.1	No alias	NAC domain containing protein 2	0.02	Archaeplastida
Pp3c26_13950V3.1	No alias	NAC 007	0.02	Archaeplastida
Pp3c6_27690V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
Pp3c8_6080V3.1	No alias	NAC domain containing protein 2	0.02	Archaeplastida
Smo74950	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
Solyc02g036430.2.1	No alias	transcription factor (NAC)	0.07	Archaeplastida
Solyc02g084350.3.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
Solyc03g080090.4.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc05g007550.3.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc06g063430.2.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc06g069100.3.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc06g073050.2.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc07g062840.3.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
Solyc08g008660.4.1	No alias	transcription factor (NAC)	0.06	Archaeplastida
Solyc08g079120.3.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc10g005010.4.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc12g017400.3.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e000198_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e001536_P002	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e006136_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e007905_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e009234_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e011786_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e014291_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e014924_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e019017_P002	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e019046_P002	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e022155_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e022817_P003	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e023019_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e025322_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e029404_P001	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e029913_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e031703_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e034111_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e034913_P002	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e034914_P001	No alias	transcription factor (NAC)	0.07	Archaeplastida
Zm00001e036590_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e036720_P002	No alias	transcription factor (NAC)	0.06	Archaeplastida
Zm00001e038267_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e039031_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e040938_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001882	nucleoside binding	IEP	Neighborhood
MF	GO:0001883	purine nucleoside binding	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0005525	GTP binding	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
BP	GO:0007264	small GTPase mediated signal transduction	IEP	Neighborhood
MF	GO:0008146	sulfotransferase activity	IEP	Neighborhood
MF	GO:0008762	UDP-N-acetylmuramate dehydrogenase activity	IEP	Neighborhood
MF	GO:0009055	electron transfer activity	IEP	Neighborhood
MF	GO:0016782	transferase activity, transferring sulfur-containing groups	IEP	Neighborhood
MF	GO:0019001	guanyl nucleotide binding	IEP	Neighborhood
MF	GO:0032549	ribonucleoside binding	IEP	Neighborhood
MF	GO:0032550	purine ribonucleoside binding	IEP	Neighborhood
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Neighborhood
BP	GO:0035556	intracellular signal transduction	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0043531	ADP binding	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	15	142

External Links

No external refs found!

AMTR_s00058p00136280 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation