AMTR_s00058p00136280 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00058.98

Description : RNA biosynthesis.transcriptional activation.NAC transcription factor


Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000015 (LandPlants) Phylogenetic Tree(s): OG_05_0000015_tree ,
OG_06_0000025 (SeedPlants) Phylogenetic Tree(s): OG_06_0000025_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00058p00136280
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00099620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
AT1G12260 EMB2749,... NAC 007 0.05 Archaeplastida
AT1G32510 NAC011, ANAC011 NAC domain containing protein 11 0.05 Archaeplastida
AT1G32770 ANAC012, NST3,... NAC domain containing protein 12 0.05 Archaeplastida
AT1G33280 BRN1, ANAC015, NAC015 NAC domain containing protein 15 0.03 Archaeplastida
AT1G54330 ANAC020, NAC020 NAC domain containing protein 20 0.03 Archaeplastida
AT1G62700 VND5, ANAC026 Arabidopsis NAC domain containing protein 26 0.05 Archaeplastida
AT1G65910 anac028, NAC028 NAC domain containing protein 28 0.02 Archaeplastida
AT1G71930 ANAC030, VND7 vascular related NAC-domain protein 7 0.04 Archaeplastida
AT1G79580 SMB, ANAC033 NAC (No Apical Meristem) domain transcriptional... 0.02 Archaeplastida
AT2G18060 VND1, ANAC037 vascular related NAC-domain protein 1 0.04 Archaeplastida
AT2G24430 ANAC039, NAC038, ANAC038 NAC domain containing protein 38 0.03 Archaeplastida
AT2G46770 NST1, ANAC043, EMB2301 NAC (No Apical Meristem) domain transcriptional... 0.04 Archaeplastida
AT3G03200 anac045, NAC045 NAC domain containing protein 45 0.06 Archaeplastida
AT3G12977 No alias NAC (No Apical Meristem) domain transcriptional... 0.03 Archaeplastida
AT3G15170 ANAC054, ATNAC1, CUC1 NAC (No Apical Meristem) domain transcriptional... 0.03 Archaeplastida
AT3G17730 anac057, NAC057 NAC domain containing protein 57 0.06 Archaeplastida
AT3G18400 anac058, NAC058 NAC domain containing protein 58 0.03 Archaeplastida
AT3G61910 NST2, NAC066, ANAC066 NAC domain protein 66 0.04 Archaeplastida
AT4G17980 anac071, NAC071 NAC domain containing protein 71 0.04 Archaeplastida
AT4G36160 VND2, NAC076, ANAC076 NAC domain containing protein 76 0.04 Archaeplastida
AT5G08790 anac081, ATAF2 NAC (No Apical Meristem) domain transcriptional... 0.05 Archaeplastida
AT5G17260 NAC086, anac086 NAC domain containing protein 86 0.08 Archaeplastida
AT5G46590 anac096, NAC096 NAC domain containing protein 96 0.04 Archaeplastida
AT5G62380 NAC101, VND6, ANAC101 NAC-domain protein 101 0.02 Archaeplastida
GSVIVT01001264001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
GSVIVT01007194001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01007982001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
GSVIVT01008291001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.08 Archaeplastida
GSVIVT01013419001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01014287001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
GSVIVT01016176001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.05 Archaeplastida
GSVIVT01018623001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.02 Archaeplastida
GSVIVT01018809001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.05 Archaeplastida
GSVIVT01019670001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.04 Archaeplastida
GSVIVT01020478001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.03 Archaeplastida
GSVIVT01027431001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.05 Archaeplastida
GSVIVT01029392001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.1 Archaeplastida
GSVIVT01035214001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.07 Archaeplastida
GSVIVT01035554001 No alias RNA biosynthesis.transcriptional activation.NAC... 0.07 Archaeplastida
Gb_07132 No alias transcription factor (NAC) 0.04 Archaeplastida
Gb_37720 No alias transcription factor (NAC) 0.03 Archaeplastida
Gb_41026 No alias transcription factor (NAC) 0.02 Archaeplastida
Gb_41540 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os01g60020.1 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os01g66120.1 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os02g15340.1 No alias transcription factor (NAC) 0.04 Archaeplastida
LOC_Os03g42630.1 No alias transcription factor (NAC) 0.03 Archaeplastida
LOC_Os03g60080.1 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os05g34600.1 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os05g34830.1 No alias transcription factor (NAC) 0.04 Archaeplastida
LOC_Os06g23650.1 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os07g12340.1 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os08g02160.1 No alias transcription factor (NAC) 0.03 Archaeplastida
LOC_Os08g02300.1 No alias transcription factor (NAC) 0.04 Archaeplastida
LOC_Os08g40030.1 No alias transcription factor (NAC) 0.03 Archaeplastida
LOC_Os09g24560.1 No alias transcription factor (NAC) 0.03 Archaeplastida
LOC_Os09g32260.2 No alias transcription factor (NAC) 0.02 Archaeplastida
LOC_Os10g42130.1 No alias transcription factor (NAC) 0.02 Archaeplastida
MA_10426704g0010 No alias transcription factor (NAC) 0.04 Archaeplastida
MA_10431189g0020 No alias transcription factor (NAC) 0.02 Archaeplastida
MA_138461g0010 No alias transcription factor (NAC) 0.05 Archaeplastida
MA_18939g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_21732g0010 No alias transcription factor (NAC) 0.02 Archaeplastida
MA_5017g0010 No alias transcription factor (NAC) 0.06 Archaeplastida
MA_73369g0010 No alias transcription factor (NAC) 0.02 Archaeplastida
MA_75192g0010 No alias transcription factor (NAC) 0.02 Archaeplastida
MA_95225g0010 No alias transcription factor (NAC) 0.02 Archaeplastida
Mp6g02590.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Pp3c20_18130V3.1 No alias NAC domain containing protein 2 0.02 Archaeplastida
Pp3c26_13950V3.1 No alias NAC 007 0.02 Archaeplastida
Pp3c6_27690V3.1 No alias NAC (No Apical Meristem) domain transcriptional... 0.03 Archaeplastida
Pp3c8_6080V3.1 No alias NAC domain containing protein 2 0.02 Archaeplastida
Smo74950 No alias RNA biosynthesis.transcriptional activation.NAC... 0.05 Archaeplastida
Solyc02g036430.2.1 No alias transcription factor (NAC) 0.07 Archaeplastida
Solyc02g084350.3.1 No alias transcription factor (NAC) 0.05 Archaeplastida
Solyc03g080090.4.1 No alias transcription factor (NAC) 0.03 Archaeplastida
Solyc05g007550.3.1 No alias transcription factor (NAC) 0.04 Archaeplastida
Solyc06g063430.2.1 No alias transcription factor (NAC) 0.04 Archaeplastida
Solyc06g069100.3.1 No alias transcription factor (NAC) 0.02 Archaeplastida
Solyc06g073050.2.1 No alias transcription factor (NAC) 0.04 Archaeplastida
Solyc07g062840.3.1 No alias transcription factor (NAC) 0.05 Archaeplastida
Solyc08g008660.4.1 No alias transcription factor (NAC) 0.06 Archaeplastida
Solyc08g079120.3.1 No alias transcription factor (NAC) 0.04 Archaeplastida
Solyc10g005010.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc12g017400.3.1 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e000198_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e001536_P002 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e006136_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e007905_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e009234_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e011786_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e014291_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e014924_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e019017_P002 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e019046_P002 No alias transcription factor (NAC) 0.05 Archaeplastida
Zm00001e022155_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e022817_P003 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e023019_P001 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e025322_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e029404_P001 No alias transcription factor (NAC) 0.05 Archaeplastida
Zm00001e029913_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e031703_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e034111_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e034913_P002 No alias transcription factor (NAC) 0.04 Archaeplastida
Zm00001e034914_P001 No alias transcription factor (NAC) 0.07 Archaeplastida
Zm00001e036590_P001 No alias transcription factor (NAC) 0.02 Archaeplastida
Zm00001e036720_P002 No alias transcription factor (NAC) 0.06 Archaeplastida
Zm00001e038267_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e039031_P001 No alias transcription factor (NAC) 0.03 Archaeplastida
Zm00001e040938_P001 No alias transcription factor (NAC) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003441 NAC-dom 15 142
No external refs found!