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Aliases : evm_27.TU.AmTr_v1.0_scaffold00058.162
Description : Cell wall.pectin.modification and degradation.polygalacturonase activities.non-catalytic polygalacturonase regulator
Gene families : OG0000327 (Archaeplastida) Phylogenetic Tree(s): OG0000327_tree ,
OG_05_0000147 (LandPlants) Phylogenetic Tree(s): OG_05_0000147_tree ,
OG_06_0001066 (SeedPlants) Phylogenetic Tree(s): OG_06_0001066_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00058p00173800 | |
| Cluster | HCCA: Cluster_255 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G60390 | PG1 | polygalacturonase 1 | 0.03 | Archaeplastida | |
| GSVIVT01013718001 | No alias | Polygalacturonase 1 beta-like protein 3 OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
| Gb_41422 | No alias | non-catalytic polygalacturonase regulator | 0.04 | Archaeplastida | |
| LOC_Os01g53240.1 | No alias | BURP domain-containing protein 3 OS=Oryza sativa subsp.... | 0.03 | Archaeplastida | |
| LOC_Os08g29200.1 | No alias | non-catalytic polygalacturonase regulator | 0.03 | Archaeplastida | |
| LOC_Os09g16010.1 | No alias | non-catalytic polygalacturonase regulator | 0.03 | Archaeplastida | |
| MA_10428132g0010 | No alias | BURP domain-containing protein 3 OS=Oryza sativa subsp.... | 0.02 | Archaeplastida | |
| MA_183840g0010 | No alias | BURP domain protein RD22 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
| MA_196669g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| MA_462957g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_5913418g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| MA_608446g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| MA_8888577g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Pp3c12_6690V3.1 | No alias | polygalacturonase 1 | 0.02 | Archaeplastida | |
| Pp3c13_16030V3.1 | No alias | polygalacturonase 2 | 0.03 | Archaeplastida | |
| Pp3c4_21630V3.1 | No alias | polygalacturonase 1 | 0.02 | Archaeplastida | |
| Solyc02g062300.3.1 | No alias | BURP domain-containing protein 3 OS=Oryza sativa subsp.... | 0.04 | Archaeplastida | |
| Solyc02g062310.1.1 | No alias | BURP domain-containing protein 3 OS=Oryza sativa subsp.... | 0.03 | Archaeplastida | |
| Solyc05g015300.4.1 | No alias | BURP domain protein RD22 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| Solyc08g068130.1.1 | No alias | BURP domain-containing protein 3 OS=Oryza sativa subsp.... | 0.02 | Archaeplastida | |
| Solyc08g068140.4.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Zm00001e019897_P001 | No alias | BURP domain-containing protein 3 OS=Oryza sativa subsp.... | 0.03 | Archaeplastida | |
| Zm00001e022326_P001 | No alias | non-catalytic polygalacturonase regulator | 0.03 | Archaeplastida | |
| Zm00001e029096_P002 | No alias | BURP domain-containing protein 3 OS=Oryza sativa subsp.... | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003690 | double-stranded DNA binding | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
| MF | GO:0004672 | protein kinase activity | IEP | Neighborhood |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005643 | nuclear pore | IEP | Neighborhood |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006298 | mismatch repair | IEP | Neighborhood |
| BP | GO:0006464 | cellular protein modification process | IEP | Neighborhood |
| BP | GO:0006468 | protein phosphorylation | IEP | Neighborhood |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Neighborhood |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| MF | GO:0008565 | protein transporter activity | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| MF | GO:0016301 | kinase activity | IEP | Neighborhood |
| BP | GO:0016310 | phosphorylation | IEP | Neighborhood |
| MF | GO:0016740 | transferase activity | IEP | Neighborhood |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Neighborhood |
| MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0030983 | mismatched DNA binding | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| BP | GO:0036211 | protein modification process | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0043412 | macromolecule modification | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004873 | BURP_dom | 414 | 553 |
| No external refs found! |