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  5. AMTR_s00058p00212160

AMTR_s00058p00212160 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00058.225

Description : Multi-process regulation.Rop GTPase regulatory system.RIP GTPase interactive protein


Gene families : OG0010548 (Archaeplastida) Phylogenetic Tree(s): OG0010548_tree ,
OG_05_0010548 (LandPlants) Phylogenetic Tree(s): OG_05_0010548_tree ,
OG_06_0010203 (SeedPlants) Phylogenetic Tree(s): OG_06_0010203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00058p00212160
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AT1G17140 RIP1, ICR1 interactor of constitutive active rops 1 0.05 Archaeplastida
AT1G78430 RIP2 ROP interactive partner 2 0.08 Archaeplastida
LOC_Os01g55280.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g43870.1 No alias GTPase effector (RIP) 0.04 Archaeplastida
Zm00001e019768_P001 No alias GTPase effector (RIP) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Neighborhood
MF GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008649 rRNA methyltransferase activity IEP Neighborhood
MF GO:0016433 rRNA (adenine) methyltransferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017056 structural constituent of nuclear pore IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!