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Aliases : evm_27.TU.AmTr_v1.0_scaffold00059.32
Description : RNA biosynthesis.transcriptional activation.GRAS transcription factor
Gene families : OG0007343 (Archaeplastida) Phylogenetic Tree(s): OG0007343_tree ,
OG_05_0005334 (LandPlants) Phylogenetic Tree(s): OG_05_0005334_tree ,
OG_06_0006035 (SeedPlants) Phylogenetic Tree(s): OG_06_0006035_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00059p00051820 | |
| Cluster | HCCA: Cluster_55 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GSVIVT01018975001 | No alias | RNA biosynthesis.transcriptional activation.GRAS... | 0.03 | Archaeplastida | |
| Zm00001e005521_P001 | No alias | transcription factor (GRAS) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | Neighborhood |
| MF | GO:0004616 | phosphogluconate dehydrogenase (decarboxylating) activity | IEP | Neighborhood |
| BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Neighborhood |
| BP | GO:0006098 | pentose-phosphate shunt | IEP | Neighborhood |
| BP | GO:0006325 | chromatin organization | IEP | Neighborhood |
| BP | GO:0006334 | nucleosome assembly | IEP | Neighborhood |
| BP | GO:0006733 | oxidoreduction coenzyme metabolic process | IEP | Neighborhood |
| BP | GO:0006739 | NADP metabolic process | IEP | Neighborhood |
| MF | GO:0009055 | electron transfer activity | IEP | Neighborhood |
| MF | GO:0015035 | protein disulfide oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0015036 | disulfide oxidoreductase activity | IEP | Neighborhood |
| BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
| MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Neighborhood |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Neighborhood |
| MF | GO:0016668 | oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor | IEP | Neighborhood |
| BP | GO:0019362 | pyridine nucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0019682 | glyceraldehyde-3-phosphate metabolic process | IEP | Neighborhood |
| CC | GO:0032993 | protein-DNA complex | IEP | Neighborhood |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Neighborhood |
| BP | GO:0034728 | nucleosome organization | IEP | Neighborhood |
| CC | GO:0044427 | chromosomal part | IEP | Neighborhood |
| CC | GO:0044815 | DNA packaging complex | IEP | Neighborhood |
| BP | GO:0046496 | nicotinamide nucleotide metabolic process | IEP | Neighborhood |
| MF | GO:0047134 | protein-disulfide reductase activity | IEP | Neighborhood |
| BP | GO:0051156 | glucose 6-phosphate metabolic process | IEP | Neighborhood |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Neighborhood |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Neighborhood |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
| BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005202 | TF_GRAS | 270 | 626 |
| No external refs found! |