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  5. AMTR_s00059p00072050

AMTR_s00059p00072050 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00059.46

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.G-class RAB GTPase


Gene families : OG0001137 (Archaeplastida) Phylogenetic Tree(s): OG0001137_tree ,
OG_05_0000971 (LandPlants) Phylogenetic Tree(s): OG_05_0000971_tree ,
OG_06_0000847 (SeedPlants) Phylogenetic Tree(s): OG_06_0000847_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00059p00072050
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AT1G52280 AtRABG3d, RABG3d RAB GTPase homolog G3D 0.06 Archaeplastida
LOC_Os01g12730.1 No alias G-class RAB GTPase 0.04 Archaeplastida
LOC_Os01g51700.1 No alias G-class RAB GTPase 0.02 Archaeplastida
Solyc01g109520.3.1 No alias G-class RAB GTPase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
BP GO:0007264 small GTPase mediated signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001806 Small_GTPase 12 132
No external refs found!