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  5. AMTR_s00059p00129260

AMTR_s00059p00129260 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00059.105

Description : SURP and G-patch domain-containing protein 1-like protein OS=Arabidopsis thaliana


Gene families : OG0005145 (Archaeplastida) Phylogenetic Tree(s): OG0005145_tree ,
OG_05_0005670 (LandPlants) Phylogenetic Tree(s): OG_05_0005670_tree ,
OG_06_0008667 (SeedPlants) Phylogenetic Tree(s): OG_06_0008667_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00059p00129260
Cluster HCCA: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
Pp3c11_4670V3.1 No alias SWAP (Suppressor-of-White-APricot)/surp... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
CC GO:0030915 Smc5-Smc6 complex IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
CC GO:0106068 SUMO ligase complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000467 G_patch_dom 354 398
IPR000061 Surp 146 197
No external refs found!