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  5. AMTR_s00059p00134630

AMTR_s00059p00134630 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00059.113

Description : Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB conjugation E2 protein (RCE1)


Gene families : OG0001800 (Archaeplastida) Phylogenetic Tree(s): OG0001800_tree ,
OG_05_0002301 (LandPlants) Phylogenetic Tree(s): OG_05_0002301_tree ,
OG_06_0003058 (SeedPlants) Phylogenetic Tree(s): OG_06_0003058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00059p00134630
Cluster HCCA: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
Mp2g16580.1 No alias RUB conjugation E2 protein (RCE1) 0.02 Archaeplastida
Pp3c13_8210V3.1 No alias Ubiquitin-conjugating enzyme family protein 0.03 Archaeplastida
Smo271739 No alias Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016881 acid-amino acid ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000015 phosphopyruvate hydratase complex IEP Neighborhood
CC GO:0000145 exocyst IEP Neighborhood
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Neighborhood
MF GO:0004634 phosphopyruvate hydratase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007154 cell communication IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0008242 omega peptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Neighborhood
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
BP GO:0030029 actin filament-based process IEP Neighborhood
BP GO:0030036 actin cytoskeleton organization IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Neighborhood
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0036442 proton-exporting ATPase activity IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
CC GO:0042765 GPI-anchor transamidase complex IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043648 dicarboxylic acid metabolic process IEP Neighborhood
CC GO:0044437 vacuolar part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044445 cytosolic part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046417 chorismate metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Neighborhood
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 33 167
No external refs found!