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  5. AMTR_s00059p00140900

AMTR_s00059p00140900 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00059.123

Description : Protein degradation.peptidase families.cysteine-type peptidase activities.PPPDE-type peptidase


Gene families : OG0000789 (Archaeplastida) Phylogenetic Tree(s): OG0000789_tree ,
OG_05_0000733 (LandPlants) Phylogenetic Tree(s): OG_05_0000733_tree ,
OG_06_0002638 (SeedPlants) Phylogenetic Tree(s): OG_06_0002638_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00059p00140900
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00181790 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.01 Archaeplastida
LOC_Os06g36490.1 No alias peptidase (PPPDE) 0.07 Archaeplastida
Mp4g10410.1 No alias peptidase (PPPDE) 0.05 Archaeplastida
Smo71744 No alias Protein degradation.peptidase families.cysteine-type... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
InterPro domains Description Start Stop
IPR008580 PPPDE_dom 42 168
No external refs found!