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  5. AMTR_s00059p00176870

AMTR_s00059p00176870 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00059.183

Description : Photosystem II D1 precursor processing protein PSB27-H2, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0005711 (Archaeplastida) Phylogenetic Tree(s): OG0005711_tree ,
OG_05_0005079 (LandPlants) Phylogenetic Tree(s): OG_05_0005079_tree ,
OG_06_0005326 (SeedPlants) Phylogenetic Tree(s): OG_06_0005326_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00059p00176870
Cluster HCCA: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
AT1G05385 Psb27-H1, LPA19 photosystem II 11 kDa protein-related 0.04 Archaeplastida
Cre02.g073850 No alias No description available 0.02 Archaeplastida
Gb_15835 No alias Photosystem II D1 precursor processing protein PSB27-H2,... 0.07 Archaeplastida
Mp6g19720.1 No alias Photosystem II D1 precursor processing protein PSB27-H2,... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR025585 PSII_Pbs27 39 194
No external refs found!