1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00059p00208110

AMTR_s00059p00208110 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00059.240

Description : Photosynthesis.photophosphorylation.cytochrome b6/f complex.component PetM/VII


Gene families : OG0007312 (Archaeplastida) Phylogenetic Tree(s): OG0007312_tree ,
OG_05_0006288 (LandPlants) Phylogenetic Tree(s): OG_05_0006288_tree ,
OG_06_0007712 (SeedPlants) Phylogenetic Tree(s): OG_06_0007712_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00059p00208110
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AT2G26500 No alias cytochrome b6f complex subunit (petM), putative 0.05 Archaeplastida
GSVIVT01009587001 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.05 Archaeplastida
LOC_Os03g55720.2 No alias component PetM/VII of cytochrome b6/f complex 0.03 Archaeplastida
MA_10294942g0010 No alias component PetM/VII of cytochrome b6/f complex 0.05 Archaeplastida
Mp1g07170.1 No alias component PetM/VII of cytochrome b6/f complex 0.03 Archaeplastida
Pp3c5_10730V3.1 No alias cytochrome b6f complex subunit (petM), putative 0.02 Archaeplastida
Pp3c6_20300V3.1 No alias cytochrome b6f complex subunit (petM), putative 0.05 Archaeplastida
Solyc01g109040.4.1 No alias component PetM/VII of cytochrome b6/f complex 0.04 Archaeplastida
Zm00001e005795_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e011966_P002 No alias component PetM/VII of cytochrome b6/f complex 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0009512 cytochrome b6f complex IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
MF GO:0009496 plastoquinol--plastocyanin reductase activity IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0034357 photosynthetic membrane IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
CC GO:0042651 thylakoid membrane IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0052880 oxidoreductase activity, acting on diphenols and related substances as donors, with copper protein as acceptor IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR012595 PetM_cyt_b6/f_cplx_su7 87 113
No external refs found!