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  5. AMTR_s00059p00217060

AMTR_s00059p00217060 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00059.258

Description : Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen


Gene families : OG0000036 (Archaeplastida) Phylogenetic Tree(s): OG0000036_tree ,
OG_05_0000965 (LandPlants) Phylogenetic Tree(s): OG_05_0000965_tree ,
OG_06_0000681 (SeedPlants) Phylogenetic Tree(s): OG_06_0000681_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00059p00217060
Cluster HCCA: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01012846001 No alias Protein SRG1 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os02g17940.1 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os03g63900.1 No alias S-norcoclaurine synthase 1 OS=Coptis japonica... 0.02 Archaeplastida
LOC_Os06g06720.1 No alias Probable 2-oxoglutarate-dependent dioxygenase ANS... 0.02 Archaeplastida
LOC_Os10g40934.1 No alias S-norcoclaurine synthase 1 OS=Coptis japonica... 0.02 Archaeplastida
MA_958517g0010 No alias Probable 2-oxoglutarate-dependent dioxygenase At3g111800... 0.02 Archaeplastida
Solyc02g071430.3.1 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc02g071470.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0043648 dicarboxylic acid metabolic process IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0046417 chorismate metabolic process IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
InterPro domains Description Start Stop
IPR026992 DIOX_N 24 160
IPR005123 Oxoglu/Fe-dep_dioxygenase 207 304
No external refs found!