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  5. AMTR_s00060p00031820

AMTR_s00060p00031820 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00060.7

Description : Photosynthesis.photophosphorylation.photosystem I.LHC-I complex.LHCa5-type component


Gene families : OG0000035 (Archaeplastida) Phylogenetic Tree(s): OG0000035_tree ,
OG_05_0009605 (LandPlants) Phylogenetic Tree(s): OG_05_0009605_tree ,
OG_06_0011490 (SeedPlants) Phylogenetic Tree(s): OG_06_0011490_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00060p00031820
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Mp7g09340.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Archaeplastida
Pp3c2_36220V3.1 No alias photosystem II light harvesting complex gene 2.1 0.03 Archaeplastida
Pp3c5_22920V3.1 No alias photosystem II light harvesting complex gene 2.2 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 61 229
No external refs found!