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  5. AMTR_s00060p00059830

AMTR_s00060p00059830 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00060.18

Description : RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor


Gene families : OG0000097 (Archaeplastida) Phylogenetic Tree(s): OG0000097_tree ,
OG_05_0000048 (LandPlants) Phylogenetic Tree(s): OG_05_0000048_tree ,
OG_06_0000021 (SeedPlants) Phylogenetic Tree(s): OG_06_0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00060p00059830
Cluster HCCA: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00236880 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
GSVIVT01022213001 No alias RNA biosynthesis.organelle... 0.04 Archaeplastida
Gb_07257 No alias TAC15 cofactor of plastid-encoded RNA polymerase.... 0.03 Archaeplastida
LOC_Os05g33440.1 No alias transcription factor (mTERF) 0.05 Archaeplastida
LOC_Os05g33460.2 No alias transcription factor (mTERF) 0.03 Archaeplastida
LOC_Os06g12070.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
LOC_Os06g12080.1 No alias transcription factor (mTERF) 0.02 Archaeplastida
LOC_Os07g24090.1 No alias transcription factor (mTERF) 0.05 Archaeplastida
LOC_Os11g09990.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
LOC_Os11g10000.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
LOC_Os11g14130.1 No alias transcription factor (mTERF) 0.04 Archaeplastida
MA_493420g0010 No alias transcription factor (mTERF) 0.04 Archaeplastida
MA_7539255g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_92135g0010 No alias transcription factor (mTERF) 0.02 Archaeplastida
Solyc04g051880.3.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
Solyc04g072500.1.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
Zm00001e022322_P001 No alias transcription factor (mTERF) 0.04 Archaeplastida
Zm00001e027097_P001 No alias transcription factor (mTERF) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0007049 cell cycle IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
InterPro domains Description Start Stop
IPR003690 MTERF 180 347
IPR003690 MTERF 95 189
No external refs found!