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  5. AMTR_s00060p00135440

AMTR_s00060p00135440 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00060.73

Description : Lipid metabolism.lipid A synthesis.LpxC UDP-3-O-acyl N-acetylglucosamine deacetylase


Gene families : OG0006264 (Archaeplastida) Phylogenetic Tree(s): OG0006264_tree ,
OG_05_0007635 (LandPlants) Phylogenetic Tree(s): OG_05_0007635_tree ,
OG_06_0006919 (SeedPlants) Phylogenetic Tree(s): OG_06_0006919_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00060p00135440
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021352.65 No alias Lipid metabolism.lipid A synthesis.LpxC UDP-3-O-acyl... 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEA Interproscan
BP GO:0009245 lipid A biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000103 sulfate assimilation IEP Neighborhood
MF GO:0004020 adenylylsulfate kinase activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0006897 endocytosis IEP Neighborhood
BP GO:0006909 phagocytosis IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
MF GO:0017089 glycolipid transporter activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0046836 glycolipid transport IEP Neighborhood
MF GO:0051861 glycolipid binding IEP Neighborhood
BP GO:0098657 import into cell IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
InterPro domains Description Start Stop
IPR004463 UDP-acyl_GlcNac_deAcase 60 314
No external refs found!