Aliases : evm_27.TU.AmTr_v1.0_scaffold00060.86
Description : Pentatricopeptide repeat-containing protein At2g01740 OS=Arabidopsis thaliana
Gene families : OG0044120 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0043692 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0038221 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00060p00144370 | |
Cluster | HCCA: Cluster_74 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
BP | GO:0000726 | non-recombinational repair | IEP | Neighborhood |
MF | GO:0003690 | double-stranded DNA binding | IEP | Neighborhood |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
MF | GO:0003917 | DNA topoisomerase type I activity | IEP | Neighborhood |
MF | GO:0003964 | RNA-directed DNA polymerase activity | IEP | Neighborhood |
MF | GO:0004386 | helicase activity | IEP | Neighborhood |
MF | GO:0004665 | prephenate dehydrogenase (NADP+) activity | IEP | Neighborhood |
MF | GO:0004835 | tubulin-tyrosine ligase activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
MF | GO:0005516 | calmodulin binding | IEP | Neighborhood |
CC | GO:0005694 | chromosome | IEP | Neighborhood |
CC | GO:0005789 | endoplasmic reticulum membrane | IEP | Neighborhood |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
BP | GO:0006265 | DNA topological change | IEP | Neighborhood |
BP | GO:0006278 | RNA-dependent DNA biosynthetic process | IEP | Neighborhood |
BP | GO:0006281 | DNA repair | IEP | Neighborhood |
BP | GO:0006298 | mismatch repair | IEP | Neighborhood |
BP | GO:0006302 | double-strand break repair | IEP | Neighborhood |
BP | GO:0006303 | double-strand break repair via nonhomologous end joining | IEP | Neighborhood |
BP | GO:0006396 | RNA processing | IEP | Neighborhood |
BP | GO:0006497 | protein lipidation | IEP | Neighborhood |
BP | GO:0006505 | GPI anchor metabolic process | IEP | Neighborhood |
BP | GO:0006506 | GPI anchor biosynthetic process | IEP | Neighborhood |
BP | GO:0006570 | tyrosine metabolic process | IEP | Neighborhood |
BP | GO:0006571 | tyrosine biosynthetic process | IEP | Neighborhood |
BP | GO:0006661 | phosphatidylinositol biosynthetic process | IEP | Neighborhood |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood |
MF | GO:0008026 | ATP-dependent helicase activity | IEP | Neighborhood |
MF | GO:0008373 | sialyltransferase activity | IEP | Neighborhood |
MF | GO:0008977 | prephenate dehydrogenase (NAD+) activity | IEP | Neighborhood |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Neighborhood |
BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | Neighborhood |
BP | GO:0009247 | glycolipid biosynthetic process | IEP | Neighborhood |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Neighborhood |
MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Neighborhood |
MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Neighborhood |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
MF | GO:0030983 | mismatched DNA binding | IEP | Neighborhood |
MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
BP | GO:0033554 | cellular response to stress | IEP | Neighborhood |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
MF | GO:0042623 | ATPase activity, coupled | IEP | Neighborhood |
MF | GO:0043168 | anion binding | IEP | Neighborhood |
BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
MF | GO:0043531 | ADP binding | IEP | Neighborhood |
BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0045017 | glycerolipid biosynthetic process | IEP | Neighborhood |
BP | GO:0046467 | membrane lipid biosynthetic process | IEP | Neighborhood |
BP | GO:0046474 | glycerophospholipid biosynthetic process | IEP | Neighborhood |
BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
BP | GO:0051716 | cellular response to stimulus | IEP | Neighborhood |
MF | GO:0070035 | purine NTP-dependent helicase activity | IEP | Neighborhood |
BP | GO:0071103 | DNA conformation change | IEP | Neighborhood |
BP | GO:0071897 | DNA biosynthetic process | IEP | Neighborhood |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 260 | 309 |
IPR002885 | Pentatricopeptide_repeat | 401 | 449 |
IPR002885 | Pentatricopeptide_repeat | 190 | 239 |
IPR002885 | Pentatricopeptide_repeat | 86 | 135 |
IPR002885 | Pentatricopeptide_repeat | 330 | 379 |
IPR002885 | Pentatricopeptide_repeat | 474 | 503 |
IPR002885 | Pentatricopeptide_repeat | 509 | 538 |
IPR002885 | Pentatricopeptide_repeat | 55 | 80 |
IPR002885 | Pentatricopeptide_repeat | 154 | 183 |
No external refs found! |