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  5. AMTR_s00061p00068850

AMTR_s00061p00068850 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00061.43

Description : Protein degradation.peptide tagging.Membrane-anchored-Ubiquitin (MUB)-anchor addition.UBC-subclass-6 conjugation E2 protein


Gene families : OG0000275 (Archaeplastida) Phylogenetic Tree(s): OG0000275_tree ,
OG_05_0000172 (LandPlants) Phylogenetic Tree(s): OG_05_0000172_tree ,
OG_06_0000190 (SeedPlants) Phylogenetic Tree(s): OG_06_0000190_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00061p00068850
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT1G64230 UBC28 ubiquitin-conjugating enzyme 28 0.03 Archaeplastida
AT2G16740 UBC29 ubiquitin-conjugating enzyme 29 0.03 Archaeplastida
AT5G41700 ATUBC8, UBC8 ubiquitin conjugating enzyme 8 0.04 Archaeplastida
AT5G53300 UBC10 ubiquitin-conjugating enzyme 10 0.03 Archaeplastida
GSVIVT01014758001 No alias Protein degradation.peptide... 0.03 Archaeplastida
GSVIVT01028729001 No alias Protein degradation.peptide... 0.03 Archaeplastida
MA_10426672g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10437205g0010 No alias conjugation E2 protein 0.02 Archaeplastida
MA_194g0030 No alias conjugation E2 protein 0.02 Archaeplastida
Mp3g18170.1 No alias conjugation E2 protein 0.02 Archaeplastida
Mp5g21800.1 No alias conjugation E2 protein 0.03 Archaeplastida
Mp7g03500.1 No alias conjugation E2 protein. E2 conjugating component COP10... 0.02 Archaeplastida
Solyc07g066080.3.1 No alias conjugation E2 protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016881 acid-amino acid ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0045926 negative regulation of growth IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 5 141
No external refs found!