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  5. AMTR_s00061p00079290

AMTR_s00061p00079290 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00061.57

Description : Auxin response factor 4 OS=Oryza sativa subsp. japonica


Gene families : OG0009027 (Archaeplastida) Phylogenetic Tree(s): OG0009027_tree ,
OG_05_0007484 (LandPlants) Phylogenetic Tree(s): OG_05_0007484_tree ,
OG_06_0009794 (SeedPlants) Phylogenetic Tree(s): OG_06_0009794_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00061p00079290
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00215020 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00061p00076370 evm_27.TU.AmTr_v1... Auxin response factor 7 OS=Oryza sativa subsp. japonica 0.01 Archaeplastida
AMTR_s00061p00076820 evm_27.TU.AmTr_v1... Auxin response factor 23 OS=Oryza sativa subsp. indica 0.04 Archaeplastida
AMTR_s00061p00077000 evm_27.TU.AmTr_v1... Auxin response factor 18 OS=Arabidopsis thaliana 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003311 AUX_IAA 16 110
No external refs found!