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  5. AMTR_s00061p00105530

AMTR_s00061p00105530 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00061.81

Description : Flowering time control protein FPA OS=Arabidopsis thaliana


Gene families : OG0003475 (Archaeplastida) Phylogenetic Tree(s): OG0003475_tree ,
OG_05_0009680 (LandPlants) Phylogenetic Tree(s): OG_05_0009680_tree ,
OG_06_0010450 (SeedPlants) Phylogenetic Tree(s): OG_06_0010450_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00061p00105530
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021493.3 No alias Polyadenylate-binding protein 2 OS=Arabidopsis thaliana 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
MF GO:0009039 urease activity IEP Neighborhood
MF GO:0016151 nickel cation binding IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019627 urea metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043419 urea catabolic process IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0043605 cellular amide catabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071941 nitrogen cycle metabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR012921 SPOC_C 409 505
No external refs found!