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  5. AMTR_s00061p00109710

AMTR_s00061p00109710 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00061.84

Description : Proteasome activator subunit 4 OS=Arabidopsis thaliana


Gene families : OG0002150 (Archaeplastida) Phylogenetic Tree(s): OG0002150_tree ,
OG_05_0003397 (LandPlants) Phylogenetic Tree(s): OG_05_0003397_tree ,
OG_06_0007780 (SeedPlants) Phylogenetic Tree(s): OG_06_0007780_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00061p00109710
Cluster HCCA: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
AT3G13330 PA200 proteasome activating protein 200 0.03 Archaeplastida
Cre14.g628702 No alias Proteasome activator subunit 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_04235 No alias Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_28180 No alias Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.08 Archaeplastida
Gb_28181 No alias Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.09 Archaeplastida
Gb_28182 No alias Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_10433922g0010 No alias Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Smo179234 No alias Proteasome activator subunit 4 OS=Arabidopsis thaliana 0.04 Archaeplastida
Zm00001e031009_P002 No alias Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004133 glycogen debranching enzyme activity IEP Neighborhood
MF GO:0004134 4-alpha-glucanotransferase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0042278 purine nucleoside metabolic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0046128 purine ribonucleoside metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901068 guanosine-containing compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
MF GO:2001070 starch binding IEP Neighborhood
InterPro domains Description Start Stop
IPR021843 PSME4_C 1727 1814
No external refs found!