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  5. AMTR_s00061p00111070

AMTR_s00061p00111070 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00061.87

Description : Putative disease resistance protein At1g59780 OS=Arabidopsis thaliana


Gene families : OG0000088 (Archaeplastida) Phylogenetic Tree(s): OG0000088_tree ,
OG_05_0000027 (LandPlants) Phylogenetic Tree(s): OG_05_0000027_tree ,
OG_06_0000027 (SeedPlants) Phylogenetic Tree(s): OG_06_0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00061p00111070
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00263900 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00044p00196010 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00061p00207600 evm_27.TU.AmTr_v1... Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00085p00102880 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00088p00152700 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00148p00037160 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.09 Archaeplastida
AMTR_s00190p00029950 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT1G10920 LOV1 NB-ARC domain-containing disease resistance protein 0.03 Archaeplastida
AT1G58410 No alias Disease resistance protein (CC-NBS-LRR class) family 0.05 Archaeplastida
AT1G59780 No alias NB-ARC domain-containing disease resistance protein 0.08 Archaeplastida
AT3G46710 No alias NB-ARC domain-containing disease resistance protein 0.02 Archaeplastida
ChrUn.fgenesh.mRNA.29 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
GSVIVT01032825001 No alias Putative disease resistance protein At1g50180... 0.04 Archaeplastida
GSVIVT01032827001 No alias Putative disease resistance protein At1g50180... 0.03 Archaeplastida
Gb_25815 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.03 Archaeplastida
LOC_Os11g12300.1 No alias Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_10429865g0020 No alias Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.03 Archaeplastida
MA_193082g0010 No alias Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.03 Archaeplastida
MA_828327g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc04g009260.3.1 No alias Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP Neighborhood
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0051259 protein complex oligomerization IEP Neighborhood
BP GO:0051260 protein homooligomerization IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 56 322
No external refs found!