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  5. AMTR_s00061p00153250

AMTR_s00061p00153250 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00061.137

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).Lys-63-linked polyubiquitination.RGLG ligating E3 protein


Gene families : OG0000512 (Archaeplastida) Phylogenetic Tree(s): OG0000512_tree ,
OG_05_0004165 (LandPlants) Phylogenetic Tree(s): OG_05_0004165_tree ,
OG_06_0000626 (SeedPlants) Phylogenetic Tree(s): OG_06_0000626_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00061p00153250
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00153710 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
AT1G67800 No alias Copine (Calcium-dependent phospholipid-binding protein) family 0.04 Archaeplastida
GSVIVT01002586001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
LOC_Os01g68060.1 No alias RING-HC-class E3 ligase. ligating E3 protein (RGLG) 0.01 Archaeplastida
LOC_Os12g19030.1 No alias RING-HC-class E3 ligase. ligating E3 protein (RGLG) 0.01 Archaeplastida
Solyc05g053870.3.1 No alias RING-HC-class E3 ligase. ligating E3 protein (RGLG) 0.04 Archaeplastida
Zm00001e018895_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e028521_P002 No alias RING-HC-class E3 ligase. ligating E3 protein (RGLG) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010734 Copine 176 265
No external refs found!