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  5. AMTR_s00061p00158010

AMTR_s00061p00158010 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00061.145

Description : Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana


Gene families : OG0002673 (Archaeplastida) Phylogenetic Tree(s): OG0002673_tree ,
OG_05_0043732 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0038262 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00061p00158010

Target Alias Description ECC score Gene Family Method Actions
Zm00001e040257_P001 No alias component BRCC45 of BRCC DNA-damage response complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 259 280
IPR002885 Pentatricopeptide_repeat 186 211
IPR002885 Pentatricopeptide_repeat 158 182
IPR002885 Pentatricopeptide_repeat 83 128
No external refs found!