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  5. AMTR_s00061p00158400

AMTR_s00061p00158400 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00061.147

Description : Solute transport.carrier-mediated transport.CDF superfamily.CDF family.manganese cation transporter (Mn-CDF-type)


Gene families : OG0000769 (Archaeplastida) Phylogenetic Tree(s): OG0000769_tree ,
OG_05_0002529 (LandPlants) Phylogenetic Tree(s): OG_05_0002529_tree ,
OG_06_0006133 (SeedPlants) Phylogenetic Tree(s): OG_06_0006133_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00061p00158400
Cluster HCCA: Cluster_232

Target Alias Description ECC score Gene Family Method Actions
Pp3c16_11060V3.1 No alias Cation efflux family protein 0.02 Archaeplastida
Pp3c2_25950V3.1 No alias Cation efflux family protein 0.03 Archaeplastida
Zm00001e019356_P001 No alias manganese cation transporter (Mn-CDF) 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006812 cation transport IEA Interproscan
MF GO:0008324 cation transmembrane transporter activity IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002524 Cation_efflux 109 387
No external refs found!