1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00061p00169370

AMTR_s00061p00169370 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00061.176

Description : RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 4


Gene families : OG0002618 (Archaeplastida) Phylogenetic Tree(s): OG0002618_tree ,
OG_05_0002545 (LandPlants) Phylogenetic Tree(s): OG_05_0002545_tree ,
OG_06_0002264 (SeedPlants) Phylogenetic Tree(s): OG_06_0002264_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00061p00169370
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AT5G09920 RPB15.9,... RNA polymerase II, Rpb4, core protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 transcription, DNA-templated IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
InterPro domains Description Start Stop
IPR005574 RPB4/RPC9 82 172
No external refs found!