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  5. AMTR_s00062p00050250

AMTR_s00062p00050250 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00062.28

Description : Solute transport.channels.GLR ligand-gated cation channel


Gene families : OG0000085 (Archaeplastida) Phylogenetic Tree(s): OG0000085_tree ,
OG_05_0000436 (LandPlants) Phylogenetic Tree(s): OG_05_0000436_tree ,
OG_06_0000332 (SeedPlants) Phylogenetic Tree(s): OG_06_0000332_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00062p00050250
Cluster HCCA: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01033163001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.03 Archaeplastida
Solyc07g052400.3.1 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004970 ionotropic glutamate receptor activity IEA Interproscan
MF GO:0005215 transporter activity IEA Interproscan
MF GO:0005234 extracellularly glutamate-gated ion channel activity IEA Interproscan
BP GO:0006810 transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
CC GO:0030288 outer membrane-bounded periplasmic space IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001320 Iontro_rcpt 590 843
IPR001828 ANF_lig-bd_rcpt 53 406
IPR001638 Solute-binding_3/MltF_N 480 811
No external refs found!