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  5. AMTR_s00062p00072320

AMTR_s00062p00072320 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00062.44

No description available


Gene families : OG0000997 (Archaeplastida) Phylogenetic Tree(s): OG0000997_tree ,
OG_05_0000601 (LandPlants) Phylogenetic Tree(s): OG_05_0000601_tree ,
OG_06_0000347 (SeedPlants) Phylogenetic Tree(s): OG_06_0000347_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00062p00072320
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00026p00201250 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00051p00204010 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00053p00054600 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00068p00058140 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00080p00090430 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00130p00118290 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00163p00017620 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00164p00051510 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
BP GO:0015893 drug transport IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0051258 protein polymerization IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
InterPro domains Description Start Stop
IPR007527 Znf_SWIM 3 25
No external refs found!