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Aliases : evm_27.TU.AmTr_v1.0_scaffold00062.49
Description : Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana
Gene families : OG0006552 (Archaeplastida) Phylogenetic Tree(s): OG0006552_tree ,
OG_05_0006851 (LandPlants) Phylogenetic Tree(s): OG_05_0006851_tree ,
OG_06_0008282 (SeedPlants) Phylogenetic Tree(s): OG_06_0008282_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00062p00076280 | |
| Cluster | HCCA: Cluster_261 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G50900 | GDC1 | Ankyrin repeat family protein | 0.06 | Archaeplastida | |
| Cre12.g551950 | No alias | Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
| GSVIVT01002001001 | No alias | Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana | 0.05 | Archaeplastida | |
| Gb_05109 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
| LOC_Os07g33660.1 | No alias | SRP insertion system TIC-to-SRP handover factor (LTD) | 0.06 | Archaeplastida | |
| Mp3g06400.1 | No alias | SRP insertion system TIC-to-SRP handover factor (LTD) | 0.09 | Archaeplastida | |
| Zm00001e035117_P001 | No alias | SRP insertion system TIC-to-SRP handover factor (LTD) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000105 | histidine biosynthetic process | IEP | Neighborhood |
| MF | GO:0000774 | adenyl-nucleotide exchange factor activity | IEP | Neighborhood |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| MF | GO:0003879 | ATP phosphoribosyltransferase activity | IEP | Neighborhood |
| MF | GO:0004784 | superoxide dismutase activity | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| MF | GO:0005319 | lipid transporter activity | IEP | Neighborhood |
| MF | GO:0005342 | organic acid transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0005343 | organic acid:sodium symporter activity | IEP | Neighborhood |
| CC | GO:0005840 | ribosome | IEP | Neighborhood |
| BP | GO:0006082 | organic acid metabolic process | IEP | Neighborhood |
| BP | GO:0006400 | tRNA modification | IEP | Neighborhood |
| BP | GO:0006412 | translation | IEP | Neighborhood |
| BP | GO:0006457 | protein folding | IEP | Neighborhood |
| BP | GO:0006518 | peptide metabolic process | IEP | Neighborhood |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0006547 | histidine metabolic process | IEP | Neighborhood |
| BP | GO:0006605 | protein targeting | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006760 | folic acid-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006801 | superoxide metabolic process | IEP | Neighborhood |
| BP | GO:0006814 | sodium ion transport | IEP | Neighborhood |
| MF | GO:0008028 | monocarboxylic acid transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0008033 | tRNA processing | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008176 | tRNA (guanine-N7-)-methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008508 | bile acid:sodium symporter activity | IEP | Neighborhood |
| MF | GO:0008509 | anion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0008514 | organic anion transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Neighborhood |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Neighborhood |
| BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
| BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Neighborhood |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Neighborhood |
| BP | GO:0009396 | folic acid-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0009451 | RNA modification | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| MF | GO:0015081 | sodium ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015125 | bile acid transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015293 | symporter activity | IEP | Neighborhood |
| MF | GO:0015294 | solute:cation symporter activity | IEP | Neighborhood |
| MF | GO:0015355 | secondary active monocarboxylate transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015370 | solute:sodium symporter activity | IEP | Neighborhood |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Neighborhood |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Neighborhood |
| MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | Neighborhood |
| MF | GO:0016763 | transferase activity, transferring pentosyl groups | IEP | Neighborhood |
| MF | GO:0016882 | cyclo-ligase activity | IEP | Neighborhood |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Neighborhood |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Neighborhood |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
| MF | GO:0030272 | 5-formyltetrahydrofolate cyclo-ligase activity | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
| BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Neighborhood |
| MF | GO:0042803 | protein homodimerization activity | IEP | Neighborhood |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Neighborhood |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Neighborhood |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Neighborhood |
| BP | GO:0043604 | amide biosynthetic process | IEP | Neighborhood |
| BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0044281 | small molecule metabolic process | IEP | Neighborhood |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| MF | GO:0046943 | carboxylic acid transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0051087 | chaperone binding | IEP | Neighborhood |
| BP | GO:0051258 | protein polymerization | IEP | Neighborhood |
| BP | GO:0052803 | imidazole-containing compound metabolic process | IEP | Neighborhood |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Neighborhood |
| MF | GO:0060590 | ATPase regulator activity | IEP | Neighborhood |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Neighborhood |
| MF | GO:0140161 | monocarboxylate:sodium symporter activity | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Neighborhood |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Neighborhood |
| MF | GO:1901618 | organic hydroxy compound transmembrane transporter activity | IEP | Neighborhood |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |