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  5. AMTR_s00062p00084940

AMTR_s00062p00084940 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00062.54

Description : Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qa-type SNARE components.SYP2-group protein


Gene families : OG0001376 (Archaeplastida) Phylogenetic Tree(s): OG0001376_tree ,
OG_05_0001071 (LandPlants) Phylogenetic Tree(s): OG_05_0001071_tree ,
OG_06_0001041 (SeedPlants) Phylogenetic Tree(s): OG_06_0001041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00062p00084940
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00242400 evm_27.TU.AmTr_v1... Vesicle trafficking.SNARE target membrane recognition... 0.04 Archaeplastida
GSVIVT01013100001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 Archaeplastida
MA_179458g0010 No alias SYP2-group Qa-type SNARE component 0.04 Archaeplastida
Solyc06g062360.3.1 No alias SYP2-group Qa-type SNARE component 0.05 Archaeplastida
Solyc08g076540.3.1 No alias SYP2-group Qa-type SNARE component 0.03 Archaeplastida
Zm00001e017251_P001 No alias SYP2-group Qa-type SNARE component 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Neighborhood
BP GO:0006732 coenzyme metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009108 coenzyme biosynthetic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0017089 glycolipid transporter activity IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0046500 S-adenosylmethionine metabolic process IEP Neighborhood
BP GO:0046836 glycolipid transport IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0051861 glycolipid binding IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
InterPro domains Description Start Stop
IPR006011 Syntaxin_N 26 112
IPR000727 T_SNARE_dom 185 247
No external refs found!