AMTR_s00062p00089640 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00062.58

Description : Probable disease resistance protein At1g15890 OS=Arabidopsis thaliana

Gene families : OG0000053 (Archaeplastida) Phylogenetic Tree(s): OG0000053_tree ,
OG_05_0000018 (LandPlants) Phylogenetic Tree(s): OG_05_0000018_tree ,
OG_06_0000005 (SeedPlants) Phylogenetic Tree(s): OG_06_0000005_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00062p00089640
Cluster	HCCA: Cluster_183

Target	Alias	Description	ECC score	Gene Family Method
AT1G15890	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.02	Archaeplastida
AT1G63350	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.01	Archaeplastida
GSVIVT01015167001	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana	0.02	Archaeplastida
Gb_01077	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Gb_22529	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os11g36410.1	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_10428204g0010	No alias	Probable disease resistance protein At5g63020...	0.11	Archaeplastida
MA_10435400g0010	No alias	no hits & (original description: none)	0.01	Archaeplastida
MA_502346g0010	No alias	no hits & (original description: none)	0.08	Archaeplastida
MA_5551624g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_91465g0010	No alias	Disease resistance protein RPS5 OS=Arabidopsis thaliana...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	163	427

External Links

No external refs found!