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  5. AMTR_s00062p00101520

AMTR_s00062p00101520 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00062.74

Description : Cytoskeleton.microtubular network.microtubule dynamics.SPR2 microtubule-stabilizing factor


Gene families : OG0000866 (Archaeplastida) Phylogenetic Tree(s): OG0000866_tree ,
OG_05_0001006 (LandPlants) Phylogenetic Tree(s): OG_05_0001006_tree ,
OG_06_0004872 (SeedPlants) Phylogenetic Tree(s): OG_06_0004872_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00062p00101520
Cluster HCCA: Cluster_228

Target Alias Description ECC score Gene Family Method Actions
AT1G50890 No alias ARM repeat superfamily protein 0.03 Archaeplastida
AT4G27060 TOR1, CN, SPR2 ARM repeat superfamily protein 0.03 Archaeplastida
GSVIVT01037609001 No alias Cytoskeleton.microtubular network.microtubule... 0.06 Archaeplastida
Gb_05823 No alias TORTIFOLIA1-like protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_31366 No alias microtubule growth pause state regulator (SPR2) 0.02 Archaeplastida
LOC_Os07g33630.1 No alias microtubule growth pause state regulator (SPR2) 0.06 Archaeplastida
MA_102352g0010 No alias TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c20_6790V3.1 No alias ARM repeat superfamily protein 0.04 Archaeplastida
Solyc10g006350.3.1 No alias microtubule growth pause state regulator (SPR2) 0.05 Archaeplastida
Zm00001e010484_P001 No alias microtubule growth pause state regulator (SPR2) 0.05 Archaeplastida
Zm00001e034876_P002 No alias TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e035114_P002 No alias microtubule growth pause state regulator (SPR2) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0000910 cytokinesis IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Neighborhood
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006471 protein ADP-ribosylation IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0008219 cell death IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!