AMTR_s00062p00106420 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00062.80

Description : Disease resistance protein SUMM2 OS=Arabidopsis thaliana

Gene families : OG0000053 (Archaeplastida) Phylogenetic Tree(s): OG0000053_tree ,
OG_05_0000018 (LandPlants) Phylogenetic Tree(s): OG_05_0000018_tree ,
OG_06_0000005 (SeedPlants) Phylogenetic Tree(s): OG_06_0000005_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00062p00106420

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00005p00238210	evm_27.TU.AmTr_v1...	Probable disease resistance protein At4g14610...	0.04	Archaeplastida
AMTR_s00056p00141280	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AMTR_s00078p00178260	evm_27.TU.AmTr_v1...	No description available	0.04	Archaeplastida
AMTR_s00099p00016360	evm_27.TU.AmTr_v1...	No description available	0.06	Archaeplastida
AMTR_s00099p00016470	evm_27.TU.AmTr_v1...	Probable disease resistance protein At4g27220...	0.07	Archaeplastida
AMTR_s00771p00010380	evm_27.TU.AmTr_v1...	Probable disease resistance protein At4g27220...	0.03	Archaeplastida
AT1G51480	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.06	Archaeplastida
AT1G52660	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Archaeplastida
AT1G62630	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.03	Archaeplastida
AT1G63350	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.02	Archaeplastida
AT5G43740	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.03	Archaeplastida
GSVIVT01016962001	No alias	Probable disease resistance protein At5g63020...	0.03	Archaeplastida
GSVIVT01017136001	No alias	Probable disease resistance protein At1g61190...	0.04	Archaeplastida
GSVIVT01038386001	No alias	Disease resistance protein SUMM2 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01038402001	No alias	Probable disease resistance protein At4g14610...	0.03	Archaeplastida
Gb_12858	No alias	Putative disease resistance protein At3g14460...	0.03	Archaeplastida
Gb_15875	No alias	Putative disease resistance protein At4g10780...	0.02	Archaeplastida
Gb_22529	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os01g57870.1	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os09g10054.1	No alias	Disease resistance protein RPS5 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_10322161g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_10426603g0010	No alias	Probable disease resistance protein At4g27220...	0.04	Archaeplastida
MA_125257g0010	No alias	Probable disease resistance protein At4g27220...	0.02	Archaeplastida
MA_359444g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_378728g0010	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_40435g0010	No alias	Probable disease resistance protein At1g61310...	0.04	Archaeplastida
MA_690530g0010	No alias	Probable disease resistance protein At5g43730...	0.02	Archaeplastida
Solyc06g048910.2.1	No alias	Disease resistance protein At4g27190 OS=Arabidopsis...	0.03	Archaeplastida
Solyc11g007790.1.1	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0005506	iron ion binding	IEP	Neighborhood
MF	GO:0009055	electron transfer activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	232	371

External Links

No external refs found!

AMTR_s00062p00106420 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation