AMTR_s00062p00106990 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00062.82

No description available


Gene families : OG0000053 (Archaeplastida) Phylogenetic Tree(s): OG0000053_tree ,
OG_05_0000018 (LandPlants) Phylogenetic Tree(s): OG_05_0000018_tree ,
OG_06_0000005 (SeedPlants) Phylogenetic Tree(s): OG_06_0000005_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00062p00106990

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00096910 evm_27.TU.AmTr_v1... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00029p00123030 evm_27.TU.AmTr_v1... Disease resistance protein RPS5 OS=Arabidopsis thaliana 0.06 Archaeplastida
AMTR_s00029p00123080 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00163p00079200 evm_27.TU.AmTr_v1... Disease resistance protein RPS5 OS=Arabidopsis thaliana 0.01 Archaeplastida
AMTR_s01155p00010600 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
MA_10432222g0010 No alias No annotation 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0033897 ribonuclease T2 activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 160 195
No external refs found!