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  5. AMTR_s00062p00115640

AMTR_s00062p00115640 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00062.96

Description : Protein degradation.ER-associated protein degradation (ERAD) machinery.DFM1 component


Gene families : OG0001674 (Archaeplastida) Phylogenetic Tree(s): OG0001674_tree ,
OG_05_0004329 (LandPlants) Phylogenetic Tree(s): OG_05_0004329_tree ,
OG_06_0004572 (SeedPlants) Phylogenetic Tree(s): OG_06_0004572_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00062p00115640
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AT4G04860 DER2.2 DERLIN-2.2 0.01 Archaeplastida
AT4G21810 DER2.1 DERLIN-2.1 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
InterPro domains Description Start Stop
IPR007599 DER1 12 212
No external refs found!