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  5. AMTR_s00062p00146590

AMTR_s00062p00146590 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00062.134

Description : Purple acid phosphatase 18 OS=Arabidopsis thaliana


Gene families : OG0001078 (Archaeplastida) Phylogenetic Tree(s): OG0001078_tree ,
OG_05_0001105 (LandPlants) Phylogenetic Tree(s): OG_05_0001105_tree ,
OG_06_0000898 (SeedPlants) Phylogenetic Tree(s): OG_06_0000898_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00062p00146590
Cluster HCCA: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01037630001 No alias Purple acid phosphatase 18 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_31158 No alias Purple acid phosphatase 22 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_31160 No alias Purple acid phosphatase 18 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os03g37130.1 No alias Purple acid phosphatase 18 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os12g05510.1 No alias Purple acid phosphatase 21 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR025733 Purple_acid_PPase_C_dom 347 404
IPR004843 Calcineurin-like_PHP_ApaH 141 331
No external refs found!