AT1G53270


Description : ABC-2 type transporter family protein


Gene families : OG0001052 (Archaeplastida) Phylogenetic Tree(s): OG0001052_tree ,
OG_05_0001355 (LandPlants) Phylogenetic Tree(s): OG_05_0001355_tree ,
OG_06_0001266 (SeedPlants) Phylogenetic Tree(s): OG_06_0001266_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G53270
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00063p00178530 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.07 Archaeplastida
GSVIVT01014222001 No alias ABC transporter G family member 10 OS=Arabidopsis thaliana 0.11 Archaeplastida
GSVIVT01022346001 No alias ABC transporter G family member 5 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01037274001 No alias Solute transport.primary active transport.ABC... 0.09 Archaeplastida
Gb_19188 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_103974g0010 No alias ABC transporter G family member 5 OS=Arabidopsis... 0.07 Archaeplastida
Mp5g05620.1 No alias subfamily ABCG transporter 0.04 Archaeplastida
Pp3c18_7000V3.1 No alias ABC-2 type transporter family protein 0.04 Archaeplastida
Pp3c26_3590V3.1 No alias ABC-2 type transporter family protein 0.02 Archaeplastida
Pp3c3_34730V3.1 No alias ABC-2 type transporter family protein 0.04 Archaeplastida
Smo88976 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Smo93898 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Solyc03g113690.1.1 No alias subfamily ABCG transporter 0.13 Archaeplastida
Solyc07g062630.1.1 No alias subfamily ABCG transporter 0.05 Archaeplastida
Zm00001e020697_P001 No alias subfamily ABCG transporter 0.04 Archaeplastida
Zm00001e031556_P001 No alias subfamily ABCG transporter 0.1 Archaeplastida
Zm00001e042020_P001 No alias ABC transporter G family member 5 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances ISS Interproscan
Type GO Term Name Evidence Source
BP GO:0000038 very long-chain fatty acid metabolic process IEP Neighborhood
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0004845 uracil phosphoribosyltransferase activity IEP Neighborhood
MF GO:0004849 uridine kinase activity IEP Neighborhood
BP GO:0006109 regulation of carbohydrate metabolic process IEP Neighborhood
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Neighborhood
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Neighborhood
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Neighborhood
BP GO:0006222 UMP biosynthetic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008655 pyrimidine-containing compound salvage IEP Neighborhood
BP GO:0009112 nucleobase metabolic process IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009119 ribonucleoside metabolic process IEP Neighborhood
BP GO:0009129 pyrimidine nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009130 pyrimidine nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009163 nucleoside biosynthetic process IEP Neighborhood
BP GO:0009173 pyrimidine ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009174 pyrimidine ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0010138 pyrimidine ribonucleotide salvage IEP Neighborhood
BP GO:0010345 suberin biosynthetic process IEP Neighborhood
BP GO:0010675 regulation of cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0010962 regulation of glucan biosynthetic process IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
MF GO:0019206 nucleoside kinase activity IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0032262 pyrimidine nucleotide salvage IEP Neighborhood
BP GO:0032881 regulation of polysaccharide metabolic process IEP Neighborhood
BP GO:0032885 regulation of polysaccharide biosynthetic process IEP Neighborhood
BP GO:0032950 regulation of beta-glucan metabolic process IEP Neighborhood
BP GO:0032951 regulation of beta-glucan biosynthetic process IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042455 ribonucleoside biosynthetic process IEP Neighborhood
BP GO:0042761 very long-chain fatty acid biosynthetic process IEP Neighborhood
BP GO:0043097 pyrimidine nucleoside salvage IEP Neighborhood
BP GO:0043173 nucleotide salvage IEP Neighborhood
BP GO:0043174 nucleoside salvage IEP Neighborhood
BP GO:0043255 regulation of carbohydrate biosynthetic process IEP Neighborhood
BP GO:0043455 regulation of secondary metabolic process IEP Neighborhood
BP GO:0044206 UMP salvage IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0046049 UMP metabolic process IEP Neighborhood
BP GO:0046112 nucleobase biosynthetic process IEP Neighborhood
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Neighborhood
BP GO:0046132 pyrimidine ribonucleoside biosynthetic process IEP Neighborhood
BP GO:0046134 pyrimidine nucleoside biosynthetic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:1900376 regulation of secondary metabolite biosynthetic process IEP Neighborhood
BP GO:1901141 regulation of lignin biosynthetic process IEP Neighborhood
BP GO:2000762 regulation of phenylpropanoid metabolic process IEP Neighborhood
BP GO:2000904 regulation of starch metabolic process IEP Neighborhood
BP GO:2001006 regulation of cellulose biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 51 201
IPR013525 ABC_2_trans 333 543
No external refs found!