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  5. AMTR_s00064p00080140

AMTR_s00064p00080140 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00064.26

Description : Ribonuclease 1 OS=Arabidopsis thaliana


Gene families : OG0000815 (Archaeplastida) Phylogenetic Tree(s): OG0000815_tree ,
OG_05_0010159 (LandPlants) Phylogenetic Tree(s): OG_05_0010159_tree ,
OG_06_0006777 (SeedPlants) Phylogenetic Tree(s): OG_06_0006777_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00064p00080140
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00114570 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
Cre06.g306550 No alias Ribonuclease 2 OS=Arabidopsis thaliana 0.02 Archaeplastida
MA_4032367g0010 No alias Ribonuclease 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc06g082890.4.1 No alias Ribonuclease 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0033897 ribonuclease T2 activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004565 beta-galactosidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
CC GO:0009341 beta-galactosidase complex IEP Neighborhood
MF GO:0015925 galactosidase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
InterPro domains Description Start Stop
IPR001568 RNase_T2-like 3 119
No external refs found!