Aliases : evm_27.TU.AmTr_v1.0_scaffold00065.15
Description : Pentatricopeptide repeat-containing protein At3g49740 OS=Arabidopsis thaliana
Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0043831 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0038362 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00065p00033910 | |
Cluster | HCCA: Cluster_196 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00003p00222920 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
AMTR_s00039p00023570 | No alias | Pentatricopeptide repeat-containing protein At4g33990... | 0.03 | Archaeplastida | |
AT1G06140 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Archaeplastida | |
AT1G56570 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Archaeplastida | |
AT1G69350 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Archaeplastida | |
AT2G02750 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | Archaeplastida | |
AT3G01580 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Archaeplastida | |
AT3G05240 | MEF19 | mitochondrial editing factor 19 | 0.04 | Archaeplastida | |
AT3G49142 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Archaeplastida | |
AT4G35130 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Archaeplastida | |
AT5G39680 | EMB2744 | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Archaeplastida | |
AT5G40410 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Archaeplastida | |
GSVIVT01036788001 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | Archaeplastida | |
Gb_08518 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | Archaeplastida | |
Gb_08890 | No alias | Pentatricopeptide repeat-containing protein At2g03880,... | 0.03 | Archaeplastida | |
Gb_16062 | No alias | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | Archaeplastida | |
Gb_39702 | No alias | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | Archaeplastida | |
LOC_Os01g01115.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | Archaeplastida | |
LOC_Os03g32620.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | Archaeplastida | |
LOC_Os04g53630.1 | No alias | Pentatricopeptide repeat-containing protein At3g20730... | 0.03 | Archaeplastida | |
LOC_Os05g24150.1 | No alias | Pentatricopeptide repeat-containing protein At2g34400... | 0.03 | Archaeplastida | |
LOC_Os05g50460.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | Archaeplastida | |
LOC_Os07g09370.1 | No alias | RNA editing factor (CRR28) | 0.02 | Archaeplastida | |
LOC_Os08g28830.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.06 | Archaeplastida | |
LOC_Os10g26070.1 | No alias | Pentatricopeptide repeat-containing protein At2g22410,... | 0.03 | Archaeplastida | |
LOC_Os10g34720.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | Archaeplastida | |
LOC_Os11g01860.1 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.03 | Archaeplastida | |
LOC_Os12g01850.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
MA_31170g0010 | No alias | RNA editing factor (MEF19) | 0.02 | Archaeplastida | |
MA_525914g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | Archaeplastida | |
MA_60579g0010 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.02 | Archaeplastida | |
MA_835083g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | Archaeplastida | |
Pp3c4_16600V3.1 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Archaeplastida | |
Smo113974 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | Archaeplastida | |
Smo34638 | No alias | Pentatricopeptide repeat-containing protein At2g03880,... | 0.03 | Archaeplastida | |
Smo81625 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | Archaeplastida | |
Solyc01g104090.4.1 | No alias | Pentatricopeptide repeat-containing protein At1g20230... | 0.03 | Archaeplastida | |
Solyc02g065410.3.1 | No alias | Pentatricopeptide repeat-containing protein At1g20230... | 0.02 | Archaeplastida | |
Solyc02g088650.1.1 | No alias | Pentatricopeptide repeat-containing protein At5g39350... | 0.03 | Archaeplastida | |
Solyc03g120460.4.1 | No alias | No annotation | 0.03 | Archaeplastida | |
Solyc04g005770.3.1 | No alias | Pentatricopeptide repeat-containing protein At2g02750... | 0.02 | Archaeplastida | |
Solyc04g051480.1.1 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | Archaeplastida | |
Solyc06g066080.1.1 | No alias | Pentatricopeptide repeat-containing protein At4g21065... | 0.02 | Archaeplastida | |
Solyc07g053520.2.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | Archaeplastida | |
Solyc09g065710.1.1 | No alias | RNA editing factor (OTP86) | 0.03 | Archaeplastida | |
Solyc11g062250.2.1 | No alias | Pentatricopeptide repeat-containing protein At2g22410,... | 0.03 | Archaeplastida | |
Zm00001e001038_P001 | No alias | Pentatricopeptide repeat-containing protein At1g08070,... | 0.02 | Archaeplastida | |
Zm00001e008200_P001 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | Archaeplastida | |
Zm00001e009339_P001 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
Zm00001e011923_P001 | No alias | Pentatricopeptide repeat-containing protein At4g21300... | 0.06 | Archaeplastida | |
Zm00001e013211_P001 | No alias | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | Archaeplastida | |
Zm00001e013531_P001 | No alias | Pentatricopeptide repeat-containing protein At2g03880,... | 0.02 | Archaeplastida | |
Zm00001e013713_P001 | No alias | Pentatricopeptide repeat-containing protein At4g20770... | 0.03 | Archaeplastida | |
Zm00001e020567_P001 | No alias | RNA editing factor (MEF7) | 0.04 | Archaeplastida | |
Zm00001e022858_P001 | No alias | Pentatricopeptide repeat-containing protein At3g57430,... | 0.04 | Archaeplastida | |
Zm00001e030553_P001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | Archaeplastida | |
Zm00001e030887_P001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | Archaeplastida | |
Zm00001e031396_P001 | No alias | Pentatricopeptide repeat-containing protein At1g20230... | 0.04 | Archaeplastida | |
Zm00001e035419_P001 | No alias | Pentatricopeptide repeat-containing protein At1g25360... | 0.03 | Archaeplastida | |
Zm00001e036537_P001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000808 | origin recognition complex | IEP | Neighborhood |
MF | GO:0003964 | RNA-directed DNA polymerase activity | IEP | Neighborhood |
MF | GO:0005543 | phospholipid binding | IEP | Neighborhood |
BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
BP | GO:0006278 | RNA-dependent DNA biosynthetic process | IEP | Neighborhood |
BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
MF | GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity | IEP | Neighborhood |
MF | GO:0015020 | glucuronosyltransferase activity | IEP | Neighborhood |
MF | GO:0015298 | solute:cation antiporter activity | IEP | Neighborhood |
MF | GO:0015299 | solute:proton antiporter activity | IEP | Neighborhood |
BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
MF | GO:0034061 | DNA polymerase activity | IEP | Neighborhood |
CC | GO:0044427 | chromosomal part | IEP | Neighborhood |
BP | GO:0071897 | DNA biosynthetic process | IEP | Neighborhood |
No external refs found! |