1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00065p00054150

AMTR_s00065p00054150 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00065.27

Description : Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type 1,4-beta-glucan synthase


Gene families : OG0000194 (Archaeplastida) Phylogenetic Tree(s): OG0000194_tree ,
OG_05_0000643 (LandPlants) Phylogenetic Tree(s): OG_05_0000643_tree ,
OG_06_0000676 (SeedPlants) Phylogenetic Tree(s): OG_06_0000676_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00065p00054150
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01009290001 No alias Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.03 Archaeplastida
Gb_04568 No alias 1,4-beta-glucan synthase (CSLC) 0.03 Archaeplastida
LOC_Os08g33740.1 No alias mannan synthase (CSLA) 0.04 Archaeplastida
Smo140200 No alias Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.03 Archaeplastida
Smo230176 No alias Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.02 Archaeplastida
Solyc02g089640.3.1 No alias 1,4-beta-glucan synthase (CSLC) 0.02 Archaeplastida
Solyc04g077470.3.1 No alias 1,4-beta-glucan synthase (CSLC) 0.04 Archaeplastida
Solyc10g083670.3.1 No alias mannan synthase (CSLA) 0.03 Archaeplastida
Solyc11g066820.2.1 No alias mannan synthase (CSLA) 0.02 Archaeplastida
Zm00001e025054_P003 No alias mannan synthase (CSLA) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
MF GO:0052736 beta-glucanase activity IEP Neighborhood
MF GO:0052861 glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group IEP Neighborhood
MF GO:0052862 glucan endo-1,4-beta-glucanase activity, C-3 substituted reducing group IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!