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  5. AMTR_s00065p00124890

AMTR_s00065p00124890 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00065.74

Description : RNA biosynthesis.transcriptional activation.BSD transcription factor


Gene families : OG0002495 (Archaeplastida) Phylogenetic Tree(s): OG0002495_tree ,
OG_05_0001801 (LandPlants) Phylogenetic Tree(s): OG_05_0001801_tree ,
OG_06_0001671 (SeedPlants) Phylogenetic Tree(s): OG_06_0001671_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00065p00124890
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AT3G49800 No alias BSD domain-containing protein 0.03 Archaeplastida
MA_73g0010 No alias transcription factor (BSD) 0.02 Archaeplastida
Solyc07g022920.3.1 No alias transcription factor (BSD) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
InterPro domains Description Start Stop
IPR005607 BSD_dom 98 155
No external refs found!