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  5. AMTR_s00065p00128940

AMTR_s00065p00128940 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00065.83

Description : U-box domain-containing protein 30 OS=Arabidopsis thaliana


Gene families : OG0000112 (Archaeplastida) Phylogenetic Tree(s): OG0000112_tree ,
OG_05_0009010 (LandPlants) Phylogenetic Tree(s): OG_05_0009010_tree ,
OG_06_0005905 (SeedPlants) Phylogenetic Tree(s): OG_06_0005905_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00065p00128940
Cluster HCCA: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
Cre10.g444100 No alias Putative U-box domain-containing protein 55... 0.02 Archaeplastida
GSVIVT01009313001 No alias U-box domain-containing protein 30 OS=Arabidopsis thaliana 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEA Interproscan
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Neighborhood
CC GO:0031248 protein acetyltransferase complex IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0070461 SAGA-type complex IEP Neighborhood
CC GO:1902493 acetyltransferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003613 Ubox_domain 56 125
No external refs found!