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  5. AMTR_s00065p00179810

AMTR_s00065p00179810 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00065.151

Description : External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp100 protein


Gene families : OG0000276 (Archaeplastida) Phylogenetic Tree(s): OG0000276_tree ,
OG_05_0002603 (LandPlants) Phylogenetic Tree(s): OG_05_0002603_tree ,
OG_06_0004579 (SeedPlants) Phylogenetic Tree(s): OG_06_0004579_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00065p00179810
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AT5G15450 CLPB3, CLPB-P, APG6 casein lytic proteinase B3 0.02 Archaeplastida
AT5G50920 HSP93-V, DCA1,... CLPC homologue 1 0.05 Archaeplastida
Cre11.g467575 No alias External stimuli response.temperature.Hsp... 0.01 Archaeplastida
GSVIVT01007880001 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
GSVIVT01011496001 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
Gb_21720 No alias organellar chaperone (Clp-p|Clp-m) 0.02 Archaeplastida
LOC_Os02g08490.1 No alias organellar chaperone (Clp-p|Clp-m) 0.03 Archaeplastida
LOC_Os03g31300.1 No alias organellar chaperone (Clp-p|Clp-m) 0.03 Archaeplastida
LOC_Os05g44340.1 No alias cytosolic chaperone (Hsp101) 0.03 Archaeplastida
MA_229920g0010 No alias Chaperone protein ClpB2, chloroplastic OS=Oryza sativa... 0.02 Archaeplastida
MA_8117g0010 No alias ATP-dependent Clp protease ATP-binding subunit ClpA... 0.06 Archaeplastida
Pp3c21_5430V3.1 No alias Clp ATPase 0.02 Archaeplastida
Pp3c3_18360V3.1 No alias CLPC homologue 1 0.03 Archaeplastida
Pp3c8_12320V3.1 No alias casein lytic proteinase B3 0.02 Archaeplastida
Smo174539 No alias External stimuli response.temperature.Hsp... 0.02 Archaeplastida
Smo411118 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
Solyc02g088610.4.1 No alias organellar chaperone (Clp-p|Clp-m) 0.02 Archaeplastida
Zm00001e002026_P002 No alias organellar chaperone (Clp-p|Clp-m) 0.03 Archaeplastida
Zm00001e008312_P001 No alias chaperone component ClpC of chloroplast Clp-type protease complex 0.02 Archaeplastida
Zm00001e039805_P002 No alias chaperone component ClpC of chloroplast Clp-type protease complex 0.06 Archaeplastida
Zm00001e040778_P001 No alias chaperone component ClpC of chloroplast Clp-type protease complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0019538 protein metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004645 phosphorylase activity IEP Neighborhood
MF GO:0004668 protein-arginine deiminase activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006595 polyamine metabolic process IEP Neighborhood
BP GO:0006596 polyamine biosynthetic process IEP Neighborhood
MF GO:0008184 glycogen phosphorylase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009309 amine biosynthetic process IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0009445 putrescine metabolic process IEP Neighborhood
BP GO:0009446 putrescine biosynthetic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0097164 ammonium ion metabolic process IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 300 416
IPR004176 Clp_N 190 241
IPR004176 Clp_N 113 164
IPR019489 Clp_ATPase_C 872 951
No external refs found!