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  5. AMTR_s00066p00081840

AMTR_s00066p00081840 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00066.61

Description : Pentatricopeptide repeat-containing protein At5g62370 OS=Arabidopsis thaliana


Gene families : OG0012150 (Archaeplastida) Phylogenetic Tree(s): OG0012150_tree ,
OG_05_0012060 (LandPlants) Phylogenetic Tree(s): OG_05_0012060_tree ,
OG_06_0012130 (SeedPlants) Phylogenetic Tree(s): OG_06_0012130_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00066p00081840
Cluster HCCA: Cluster_171


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019107 myristoyltransferase activity IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 222 253
IPR002885 Pentatricopeptide_repeat 452 483
IPR002885 Pentatricopeptide_repeat 851 878
IPR002885 Pentatricopeptide_repeat 665 714
IPR002885 Pentatricopeptide_repeat 490 539
IPR002885 Pentatricopeptide_repeat 358 405
IPR002885 Pentatricopeptide_repeat 784 831
IPR002885 Pentatricopeptide_repeat 595 644
IPR002885 Pentatricopeptide_repeat 289 337
IPR002885 Pentatricopeptide_repeat 191 215
IPR002885 Pentatricopeptide_repeat 564 586
IPR002885 Pentatricopeptide_repeat 929 956
IPR002885 Pentatricopeptide_repeat 893 922
IPR002885 Pentatricopeptide_repeat 257 286
IPR002885 Pentatricopeptide_repeat 117 141
No external refs found!