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  5. AMTR_s00066p00152910

AMTR_s00066p00152910 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00066.155

Description : Cytoskeleton.cytoskeleton-plasma membrane-cell wall interface.IQD13 microtubule - plasma membrane linkage regulator


Gene families : OG0000181 (Archaeplastida) Phylogenetic Tree(s): OG0000181_tree ,
OG_05_0013923 (LandPlants) Phylogenetic Tree(s): OG_05_0013923_tree ,
OG_06_0012882 (SeedPlants) Phylogenetic Tree(s): OG_06_0012882_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00066p00152910
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AT2G33990 iqd9 IQ-domain 9 0.03 Archaeplastida
AT3G15050 IQD10 IQ-domain 10 0.09 Archaeplastida
AT5G35670 iqd33 IQ-domain 33 0.05 Archaeplastida
GSVIVT01014238001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.09 Archaeplastida
Gb_36296 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Gb_40747 No alias microtubule - plasma membrane linkage regulator (IQD13) 0.03 Archaeplastida
LOC_Os03g04210.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g03190.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os06g40850.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10430537g0050 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_40034g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_6756408g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8080485g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_91691g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_9851g0010 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp5g20460.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp8g06010.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c12_25060V3.1 No alias IQ-domain 2 0.03 Archaeplastida
Pp3c21_11850V3.1 No alias IQ-domain 3 0.04 Archaeplastida
Pp3c26_2929V3.1 No alias IQ-domain 2 0.02 Archaeplastida
Smo438938 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc01g009340.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc02g077260.3.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc02g083285.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc10g005000.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc10g008790.3.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc12g014130.2.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.11 Archaeplastida
Zm00001e027583_P001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e029506_P001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e036466_P001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP Neighborhood
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 102 120
IPR025064 DUF4005 345 424
No external refs found!